Vibrio campbellii str. DS40M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii str. DS40M4 is a Gram-negative bacterium that thrives optimally at a temperature of 35.0°C. This strain is predominantly found in marine environments, specifically within the Changjiang estuary and various coastal sites. The genomic architecture of V. campbellii str. DS40M4 is characterized by the presence of two replicons, indicating a complex genetic organization that may contribute to its adaptability in marine ecosystems. The genomic information for this strain is available under the accessions NZ_CP030790.1 and NZ_CP030789.1, which may provide further insights into its genetic and functional capabilities. The ecological niche of V. campbellii str. DS40M4 suggests its potential role in nutrient cycling and interactions within marine microbial communities, highlighting its importance in coastal ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
StrainDS40M4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii str. DS40M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain DS40M4 chromosome 2, complete sequence.

Gene Summary

Adenine Count

519530 bp

Thymine Count

522587 bp

Guanine Count

420652 bp

Cytosine Count

415254 bp

Genome Length

1878023 bp

Protein-coding Genes

1719 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath large subunitDSB67_RS24960Not AvailableNegative1851198 - 185267355521.5
type vi secretion system contractile sheath small subunitDSB67_RS24965Not AvailableNegative1852682 - 185318818654.0
type vi secretion system protein tssaDSB67_RS24970Not AvailableNegative1853215 - 185481659984.2
serine/threonine protein kinaseDSB67_RS24975Not AvailableNegative1854816 - 185681974719.2
hypothetical proteinDSB67_RS24980Not AvailableNegative1857054 - 185799834842.2
duf2169 domain-containing proteinDSB67_RS24985Not AvailableNegative1857991 - 185898337668.5
hypothetical proteinDSB67_RS24990Not AvailableNegative1858964 - 186028350717.8
hypothetical proteinDSB67_RS24995Not AvailableNegative1860341 - 186082618029.5
type vi secretion system tip protein vgrgDSB67_RS25000Not AvailableNegative1860826 - 186290477131.7
hcp family type vi secretion system effectorDSB67_RS25005Not AvailableNegative1862977 - 186349519406.9

Displaying genes 1761 – 1770 of 1860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.