Vibrio campbellii str. DS40M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii str. DS40M4 is a Gram-negative bacterium that thrives optimally at a temperature of 35.0°C. This strain is predominantly found in marine environments, specifically within the Changjiang estuary and various coastal sites. The genomic architecture of V. campbellii str. DS40M4 is characterized by the presence of two replicons, indicating a complex genetic organization that may contribute to its adaptability in marine ecosystems. The genomic information for this strain is available under the accessions NZ_CP030790.1 and NZ_CP030789.1, which may provide further insights into its genetic and functional capabilities. The ecological niche of V. campbellii str. DS40M4 suggests its potential role in nutrient cycling and interactions within marine microbial communities, highlighting its importance in coastal ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
StrainDS40M4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii str. DS40M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain DS40M4 chromosome 2, complete sequence.

Gene Summary

Adenine Count

519530 bp

Thymine Count

522587 bp

Guanine Count

420652 bp

Cytosine Count

415254 bp

Genome Length

1878023 bp

Protein-coding Genes

1719 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome bDSB67_RS23960Not AvailablePositive1662909 - 166344819955.5
ycei family proteinDSB67_RS23965Not AvailablePositive1663445 - 166401420279.9
formate transporter focaDSB67_RS23970Not AvailableNegative1664139 - 166559052050.1
lysr substrate-binding domain-containing proteinDSB67_RS23980Not AvailablePositive1665877 - 166678234193.3
duf1097 domain-containing proteinDSB67_RS23985Not AvailablePositive1667079 - 166755816823.8
duf2813 domain-containing proteinDSB67_RS23990Not AvailableNegative1667699 - 166933362346.4
bifunctional metallophosphatase/5'-nucleotidaseDSB67_RS23995Not AvailablePositive1669607 - 167134964244.2
terc family proteinDSB67_RS24000Not AvailablePositive1671879 - 167289838241.5
hypothetical proteinDSB67_RS24005Not AvailablePositive1673177 - 16733687099.62
homocysteine s-methyltransferase family proteinDSB67_RS24010Not AvailableNegative1673485 - 167440233812.2

Displaying genes 1571 – 1580 of 1860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.