Vibrio campbellii str. DS40M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii str. DS40M4 is a Gram-negative bacterium that thrives optimally at a temperature of 35.0°C. This strain is predominantly found in marine environments, specifically within the Changjiang estuary and various coastal sites. The genomic architecture of V. campbellii str. DS40M4 is characterized by the presence of two replicons, indicating a complex genetic organization that may contribute to its adaptability in marine ecosystems. The genomic information for this strain is available under the accessions NZ_CP030790.1 and NZ_CP030789.1, which may provide further insights into its genetic and functional capabilities. The ecological niche of V. campbellii str. DS40M4 suggests its potential role in nutrient cycling and interactions within marine microbial communities, highlighting its importance in coastal ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
StrainDS40M4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii str. DS40M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain DS40M4 chromosome 2, complete sequence.

Gene Summary

Adenine Count

519530 bp

Thymine Count

522587 bp

Guanine Count

420652 bp

Cytosine Count

415254 bp

Genome Length

1878023 bp

Protein-coding Genes

1719 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix hydrolaseDSB67_RS16210Not AvailableNegative90154 - 9059116403.6
murein l,d-transpeptidase catalytic domain family proteinDSB67_RS16215Not AvailablePositive91166 - 9180723758.6
hypothetical proteinDSB67_RS16220Not AvailablePositive92018 - 9242515639.5
hypothetical proteinDSB67_RS16225Not AvailablePositive92520 - 9283711948.3
is5 family transposaseDSB67_RS16230Not AvailableNegative92923 - 9327613047.0
duf4136 domain-containing proteinDSB67_RS16235Not AvailableNegative93319 - 9383719119.5
Trna-glyNot AvailableNot AvailablePositive94163 - 94237Not Available
hypothetical proteinDSB67_RS16250Not AvailableNegative94422 - 9482915130.4
sterol desaturase family proteinDSB67_RS16255Not AvailableNegative94933 - 9579033916.4
duf2804 domain-containing proteinDSB67_RS16260Not AvailableNegative95800 - 9681039003.1

Displaying genes 121 – 130 of 1860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.