Escherichia coli str. PF9285

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain PF9285 is a Gram-negative, rod-shaped bacterium that exhibits a cell arrangement predominantly in pairs and singles. This strain thrives optimally at a temperature of 37.0°C, which is characteristic of many mesophilic organisms, particularly those associated with warm-blooded hosts. As a facultative anaerobe, E. coli PF9285 possesses the metabolic versatility to utilize both aerobic and anaerobic respiration, allowing it to adapt to varying oxygen conditions within its host-associated habitat. The ecological niche of E. coli PF9285 underscores its potential role in host microbiomes, where it may contribute to essential processes such as nutrient metabolism and gut homeostasis. The ability of this strain to grow in both oxygen-rich and oxygen-depleted environments suggests that it can occupy diverse microenvironments within the host, potentially influencing microbial community dynamics. This adaptability not only highlights the metabolic resilience of E. coli PF9285 but also emphasizes its significance in the complex interactions that occur within host-associated microbial ecosystems. Further research may elucidate the specific functions and interactions of this strain within its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainPF9285

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. PF9285
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence.

Gene Summary

Adenine Count

33548 bp

Thymine Count

32963 bp

Guanine Count

30382 bp

Cytosine Count

33027 bp

Genome Length

129920 bp

Protein-coding Genes

150 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive65835 - 65847Not Available
AttlNot AvailableNot AvailablePositive74215 - 74226Not Available
AttlNot AvailableNot AvailablePositive80556 - 80570Not Available
Transposase is26E5M00_RS00500Not AvailablePositive80620 - 8132427896.9
RepaE5M00_RS00510Not AvailablePositive81374 - 8209325927.0
replication protein c, incq-typeE5M00_RS00515Not AvailablePositive82080 - 8293131090.6
sulfonamide-resistant dihydropteroate synthase sul2E5M00_RS00525Not AvailablePositive83239 - 8405428529.2
aminoglycoside o-phosphotransferase aph(3'')-ibE5M00_RS00530Not AvailablePositive84115 - 8491829588.2
aminoglycoside o-phosphotransferase aph(6)-idE5M00_RS00535Not AvailablePositive84918 - 8575430825.7
AttrNot AvailableNot AvailablePositive85762 - 85776Not Available

Displaying genes 1 – 10 of 5427 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total