Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family plasmid partition protein | MS8345_RS28980 | Not Available | Positive | 29963 - 30934 | 35388.3 |
| integrase core domain-containing protein | MS8345_RS30705 | Not Available | Positive | 31571 - 31740 | 6712.13 |
| hypothetical protein | MS8345_RS30205 | Not Available | Positive | 31737 - 32084 | 12301.4 |
| mobilome cxxcx(11)cxxc protein | MS8345_RS28990 | Not Available | Positive | 32153 - 32728 | 21676.6 |
| hypothetical protein | MS8345_RS28995 | Not Available | Positive | 32741 - 32953 | 7988.53 |
| is3 family transposase | MS8345_RS29000 | Not Available | Positive | 33132 - 34345 | 46153.0 |
| integrase core domain-containing protein | MS8345_RS30710 | Not Available | Negative | 34650 - 34903 | 9226.94 |
| hypothetical protein | MS8345_RS29015 | Not Available | Positive | 35420 - 35650 | 8582.57 |
| duf3560 domain-containing protein | MS8345_RS29020 | Not Available | Positive | 35702 - 37063 | 51717.2 |
| class i sam-dependent methyltransferase | MS8345_RS29025 | Not Available | Positive | 37111 - 37674 | 21061.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





