Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
64480 bp
Thymine Count
65049 bp
Guanine Count
55157 bp
Cytosine Count
56476 bp
Genome Length
241162 bp
Protein-coding Genes
240 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | MS8345_RS28805 | Not Available | Positive | 132 - 872 | 28192.5 |
| repb family plasmid replication initiator protein | MS8345_RS28810 | Not Available | Negative | 1157 - 2134 | 37317.0 |
| integrase core domain-containing protein | MS8345_RS28820 | Not Available | Positive | 2880 - 3203 | 12961.1 |
| integrase core domain-containing protein | MS8345_RS30200 | Not Available | Positive | 3205 - 3309 | 3832.48 |
| integrase core domain-containing protein | MS8345_RS28830 | Not Available | Positive | 3370 - 3883 | 17986.5 |
| is1-like element is1a family transposase | MS8345_RS28835 | Not Available | Negative | 4063 - 4760 | 26483.3 |
| iron/manganese abc transporter substrate-binding protein sita | MS8345_RS28850 | Not Available | Positive | 5116 - 6030 | 33424.1 |
| iron/manganese abc transporter atp-binding protein sitb | MS8345_RS28855 | Not Available | Positive | 6030 - 6857 | 30104.5 |
| iron/manganese abc transporter permease subunit sitc | MS8345_RS28860 | Not Available | Positive | 6854 - 7711 | 30762.6 |
| iron/manganese abc transporter permease subunit sitd | MS8345_RS28865 | Not Available | Positive | 7708 - 8565 | 30727.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





