Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | MS8345_RS28870 | Not Available | Negative | 8799 - 9056 | 9168.9 |
| integrase core domain-containing protein | MS8345_RS28875 | Not Available | Positive | 9054 - 9467 | 15115.8 |
| integrase core domain-containing protein | MS8345_RS30700 | Not Available | Positive | 9808 - 9912 | 3849.88 |
| is3 family transposase | MS8345_RS28890 | Not Available | Positive | 9966 - 11179 | 46183.0 |
| integrase core domain-containing protein | MS8345_RS28895 | Not Available | Positive | 11217 - 11501 | 10138.8 |
| mfs transporter | MS8345_RS28900 | Not Available | Negative | 11881 - 13074 | 41648.6 |
| aerobactin synthase iuca | MS8345_RS28905 | Not Available | Positive | 13210 - 14934 | 65352.9 |
| n(6)-hydroxylysine o-acetyltransferase iucb | MS8345_RS28910 | Not Available | Positive | 14935 - 15882 | 37148.1 |
| nis family aerobactin synthetase iucc | MS8345_RS28915 | Not Available | Positive | 15882 - 17624 | 66731.5 |
| integrase core domain-containing protein | MS8345_RS28920 | Not Available | Positive | 17621 - 18954 | 50857.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





