Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trah | MS8345_RS29245 | Not Available | Positive | 65643 - 66986 | 49197.8 |
| conjugal transfer mating-pair stabilization protein trag | MS8345_RS29250 | Not Available | Positive | 66983 - 69805 | 102717.0 |
| hypothetical protein | MS8345_RS29255 | Not Available | Positive | 69820 - 70323 | 19372.4 |
| conjugal transfer complement resistance protein trat | MS8345_RS29260 | Not Available | Positive | 70355 - 71086 | 25845.0 |
| type iv conjugative transfer system coupling protein trad | MS8345_RS29265 | Not Available | Positive | 71338 - 73536 | 83218.4 |
| conjugative transfer relaxase/helicase trai | MS8345_RS29270 | Not Available | Positive | 73536 - 78806 | 191855.0 |
| conjugal transfer pilus acetylase trax | MS8345_RS29275 | Not Available | Positive | 78826 - 79572 | 27205.4 |
| fertility inhibition protein fino | MS8345_RS29280 | Not Available | Positive | 79627 - 80187 | 21103.7 |
| hypothetical protein | MS8345_RS29285 | Not Available | Positive | 80325 - 80537 | 8207.77 |
| integrase core domain-containing protein | MS8345_RS29290 | Not Available | Positive | 80780 - 81136 | 13856.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





