Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus-stabilizing protein trap | MS8345_RS29145 | Not Available | Positive | 51503 - 52093 | 21962.6 |
| conjugal transfer protein trbd | MS8345_RS29150 | Not Available | Positive | 52080 - 52277 | 7025.55 |
| conjugal transfer protein trbg | MS8345_RS29155 | Not Available | Positive | 52289 - 52540 | 9126.86 |
| type iv conjugative transfer system lipoprotein trav | MS8345_RS29160 | Not Available | Positive | 52537 - 53052 | 18525.3 |
| integrase core domain-containing protein | MS8345_RS29165 | Not Available | Positive | 53187 - 53255 | 2542.89 |
| is3 family transposase | MS8345_RS29170 | Not Available | Positive | 53309 - 54522 | 46183.0 |
| conjugal transfer protein trar | MS8345_RS29175 | Not Available | Positive | 54509 - 54721 | 8071.81 |
| type iv secretion system protein trac | MS8345_RS29180 | Not Available | Positive | 54881 - 57508 | 99170.3 |
| type-f conjugative transfer system protein trbi | MS8345_RS29185 | Not Available | Positive | 57505 - 57891 | 14163.0 |
| type-f conjugative transfer system protein traw | MS8345_RS29190 | Not Available | Positive | 57888 - 58520 | 23631.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





