Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | MS8345_RS29555 | Not Available | Negative | 123795 - 124982 | 43426.5 |
| integrase core domain-containing protein | MS8345_RS30745 | Not Available | Negative | 125577 - 125917 | 12219.8 |
| integrase core domain-containing protein | MS8345_RS29560 | Not Available | Positive | 125963 - 126288 | 12562.0 |
| is3 family transposase | MS8345_RS29565 | Not Available | Negative | 126436 - 127649 | 46028.8 |
| integrase core domain-containing protein | MS8345_RS29570 | Not Available | Positive | 127788 - 127967 | 7065.4 |
| omptin family outer membrane protease | MS8345_RS29585 | Not Available | Positive | 129264 - 130217 | 35635.3 |
| sdr family oxidoreductase | MS8345_RS29595 | Not Available | Positive | 130650 - 131759 | 41024.3 |
| antimicrobial resistance protein mig-14 | MS8345_RS29600 | Not Available | Positive | 131828 - 132730 | 35088.6 |
| Attl | Not Available | Not Available | Positive | 69730 - 69741 | Not Available |
| Attl | Not Available | Not Available | Positive | 69852 - 69863 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





