Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | MS8345_RS29490 | Not Available | Positive | 111309 - 111508 | 7140.37 |
| increased serum survival lipoprotein iss | MS8345_RS29495 | Not Available | Negative | 111566 - 111859 | 10448.8 |
| is3-like element is2 family transposase | MS8345_RS29505 | Not Available | Positive | 112486 - 113714 | 46426.8 |
| is3 family transposase | MS8345_RS29510 | Not Available | Positive | 114485 - 115698 | 46183.0 |
| cobw family gtp-binding protein | MS8345_RS29520 | Not Available | Positive | 116251 - 117444 | 44768.0 |
| integrase core domain-containing protein | MS8345_RS29525 | Not Available | Positive | 117622 - 117771 | 5737.0 |
| integrase core domain-containing protein | MS8345_RS29530 | Not Available | Positive | 118081 - 118536 | 17492.6 |
| is4-like element is4 family transposase | MS8345_RS29540 | Not Available | Positive | 118767 - 120113 | 51173.8 |
| tolc family protein | MS8345_RS29545 | Not Available | Negative | 120484 - 121854 | 51583.3 |
| macb family efflux pump subunit | MS8345_RS29550 | Not Available | Negative | 121858 - 123798 | 70417.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





