Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | MS8345_RS29415 | Not Available | Positive | 95879 - 96004 | 4898.97 |
| duf6404 family protein | MS8345_RS29420 | Not Available | Positive | 96172 - 96465 | 11369.3 |
| integrase core domain-containing protein | MS8345_RS30740 | Not Available | Negative | 96543 - 96844 | 11251.8 |
| 3-deoxy-7-phosphoheptulonate synthase | MS8345_RS29430 | Not Available | Positive | 97025 - 98059 | 38227.2 |
| siderophore salmochelin receptor iron | MS8345_RS29450 | Not Available | Positive | 98910 - 101087 | 79152.9 |
| catecholate siderophore esterase iroe | MS8345_RS29455 | Not Available | Negative | 101132 - 102088 | 35443.9 |
| catecholate siderophore esterase irod | MS8345_RS29460 | Not Available | Negative | 102173 - 103402 | 44665.6 |
| salmochelin/enterobactin export abc transporter iroc | MS8345_RS29465 | Not Available | Negative | 103506 - 107165 | 131863.0 |
| salmochelin biosynthesis c-glycosyltransferase irob | MS8345_RS29470 | Not Available | Negative | 107305 - 108420 | 40280.6 |
| integrase core domain-containing protein | MS8345_RS29480 | Not Available | Negative | 109725 - 110755 | 36685.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





