Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | MS8345 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
34123 bp
Thymine Count
33002 bp
Guanine Count
34467 bp
Cytosine Count
31689 bp
Genome Length
133281 bp
Protein-coding Genes
138 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication regulatory protein repa | MS8345_RS29295 | Not Available | Positive | 81226 - 81486 | 10052.4 |
| repa leader peptide tap | MS8345_RS30965 | Not Available | Positive | 81712 - 81786 | 2699.38 |
| incfii family plasmid replication initiator repa | MS8345_RS29310 | Not Available | Positive | 81779 - 82636 | 32801.7 |
| type ii toxin-antitoxin system antitoxin yaca | MS8345_RS29325 | Not Available | Positive | 83552 - 83821 | 10253.2 |
| type ii toxin-antitoxin system toxin yacb | MS8345_RS29330 | Not Available | Positive | 83821 - 84099 | 10763.0 |
| 3'-5' exonuclease | MS8345_RS29335 | Not Available | Positive | 84145 - 84993 | 30916.9 |
| colicin ia central receptor-binding domain-containing protein | MS8345_RS29340 | Not Available | Positive | 85179 - 87059 | 69433.9 |
| colicin 1a immunity protein | MS8345_RS29345 | Not Available | Negative | 87081 - 87416 | 13251.4 |
| integrase core domain-containing protein | MS8345_RS29355 | Not Available | Positive | 87545 - 87760 | 8446.65 |
| hypothetical protein | MS8345_RS29360 | Not Available | Negative | 87822 - 88412 | 21497.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





