Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | BVL39_RS29380 | Not Available | Positive | 174303 - 174377 | 2930.71 |
| hok/gef family protein | BVL39_RS28705 | Not Available | Positive | 174738 - 174887 | 5543.0 |
| replication regulatory protein repa | BVL39_RS28710 | Not Available | Positive | 175171 - 175428 | 9595.37 |
| repa leader peptide tap | BVL39_RS30080 | Not Available | Positive | 175660 - 175734 | 2588.29 |
| hypothetical protein | BVL39_RS28725 | Not Available | Positive | 175727 - 176209 | 17792.5 |
| incfii family plasmid replication initiator repa | BVL39_RS28730 | Not Available | Positive | 176202 - 177059 | 32700.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | BVL39_RS28735 | Not Available | Positive | 178022 - 178273 | 9211.91 |
| type ii toxin-antitoxin system rele family toxin | BVL39_RS28740 | Not Available | Positive | 178270 - 178557 | 11105.8 |
| is3 family transposase | BVL39_RS29835 | Not Available | Positive | 178661 - 178981 | 12492.7 |
| is3 family transposase | BVL39_RS28750 | Not Available | Negative | 178997 - 179344 | 13724.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





