Escherichia coli str. CRE1540

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CRE1540 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain, like many members of the E. coli species, exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. E. coli CRE1540 has an optimal growth temperature of 37.0°C, which aligns with the typical physiological temperature of mammalian hosts, suggesting its adaptation to a host-associated habitat. The facultative anaerobic nature of E. coli CRE1540 indicates its versatility in utilizing oxygen for respiration when available, while also being capable of fermentation processes under anaerobic conditions. This metabolic flexibility is a significant trait that enables the organism to survive in various environments within the host, such as the gastrointestinal tract, where oxygen levels can fluctuate. Understanding the specialized traits of E. coli CRE1540 may provide insights into its role within the microbiome of its host, as well as its interactions with other microbial communities. The ability to grow in pairs or as single cells may reflect adaptive strategies for colonization and resource utilization in dynamic environments, further emphasizing the importance of studying strain-specific characteristics in understanding microbial ecology and physiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainCRE1540

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. CRE1540
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CRE1540 plasmid p1540-4, complete

Gene Summary

Adenine Count

46870 bp

Thymine Count

46794 bp

Guanine Count

46335 bp

Cytosine Count

44167 bp

Genome Length

184166 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Major tail tube protein tubbBVL39_RS26985Not AvailableNegative547 - 115822318.7
PmgcBVL39_RS26990Not AvailableNegative1169 - 173521065.3
Conserved membrane protein of unknown functionBVL39_RS26995Not AvailableNegative1816 - 235520299.8
Putative outer membrane lipoproteinBVL39_RS27000Not AvailableNegative2359 - 287117155.5
Cell division repressor icdBVL39_RS27010Not AvailablePositive3493 - 37148313.71
Ant1BVL39_RS27015Not AvailablePositive3711 - 475438312.7
Putative host killing proteinBVL39_RS27020Not AvailablePositive4918 - 571829547.7
ReplBVL39_RS27025Not AvailablePositive5748 - 659330927.3
Hypothetical proteinBVL39_RS27030Not AvailablePositive6644 - 68899518.98
Host killer proteinBVL39_RS27035Not AvailablePositive7071 - 72265784.31

Displaying genes 1 – 10 of 414 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total