Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system pilin traa | BVL39_RS28605 | Not Available | Positive | 155491 - 155856 | 12769.3 |
| type iv conjugative transfer system protein tral | BVL39_RS28610 | Not Available | Positive | 155871 - 156182 | 11904.7 |
| type iv conjugative transfer system protein trae | BVL39_RS28615 | Not Available | Positive | 156204 - 156770 | 21225.5 |
| type-f conjugative transfer system secretin trak | BVL39_RS28620 | Not Available | Positive | 156757 - 157485 | 25628.6 |
| f-type conjugal transfer pilus assembly protein trab | BVL39_RS28625 | Not Available | Positive | 157485 - 158912 | 50462.8 |
| conjugal transfer pilus-stabilizing protein trap | BVL39_RS28630 | Not Available | Positive | 158902 - 159492 | 22020.7 |
| conjugal transfer protein trbd | BVL39_RS28635 | Not Available | Positive | 159479 - 159676 | 7025.55 |
| conjugal transfer protein trbg | BVL39_RS28640 | Not Available | Positive | 159688 - 159939 | 9126.86 |
| is3 family transposase | BVL39_RS29375 | Not Available | Positive | 159936 - 160370 | 15499.7 |
| is3 family transposase | BVL39_RS28645 | Not Available | Positive | 160371 - 161639 | 46218.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





