Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | BVL39_RS28515 | Not Available | Negative | 142009 - 142980 | 35807.8 |
| is3 family transposase | BVL39_RS29810 | Not Available | Negative | 143151 - 143231 | 3244.93 |
| hypothetical protein | BVL39_RS29370 | Not Available | Positive | 143301 - 143507 | 7437.17 |
| single-stranded dna-binding protein | BVL39_RS28525 | Not Available | Positive | 143533 - 144072 | 19687.2 |
| duf905 family protein | BVL39_RS28530 | Not Available | Positive | 144130 - 144363 | 9100.74 |
| parb/repb/spo0j family partition protein | BVL39_RS28535 | Not Available | Positive | 144422 - 146386 | 71897.6 |
| conjugation system sos inhibitor psib | BVL39_RS28540 | Not Available | Positive | 146455 - 146889 | 15791.7 |
| is3 family transposase | BVL39_RS28545 | Not Available | Positive | 146886 - 147089 | 7663.12 |
| is21-like element isec12 family helper atpase istb | BVL39_RS28550 | Not Available | Negative | 147171 - 147917 | 28348.2 |
| is21-like element isec12 family transposase | BVL39_RS28555 | Not Available | Negative | 147932 - 149473 | 59358.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





