Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element is3 family transposase | BVL39_RS28445 | Not Available | Negative | 134239 - 135401 | 45023.8 |
| is110-like element isec32 family transposase | BVL39_RS28450 | Not Available | Negative | 135840 - 136811 | 35866.9 |
| antirestriction protein | BVL39_RS28460 | Not Available | Positive | 137213 - 137638 | 16344.5 |
| duf1380 family protein | BVL39_RS28465 | Not Available | Positive | 137685 - 138104 | 15642.6 |
| hypothetical protein | BVL39_RS28470 | Not Available | Positive | 138104 - 138286 | 6870.28 |
| is3 family transposase | BVL39_RS29805 | Not Available | Negative | 138510 - 138763 | 9303.03 |
| hypothetical protein | BVL39_RS28490 | Not Available | Positive | 139278 - 139508 | 8605.61 |
| duf3560 domain-containing protein | BVL39_RS28495 | Not Available | Positive | 139560 - 140921 | 51782.2 |
| class i sam-dependent methyltransferase | BVL39_RS28500 | Not Available | Positive | 140968 - 141531 | 21047.7 |
| is3 family transposase | BVL39_RS29365 | Not Available | Negative | 141617 - 142049 | 15392.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





