Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin ccda | BVL39_RS28350 | Not Available | Positive | 117211 - 117429 | 8354.72 |
| type ii toxin-antitoxin system toxin ccdb | BVL39_RS28355 | Not Available | Positive | 117431 - 117736 | 11693.2 |
| site-specific integrase | BVL39_RS28360 | Not Available | Positive | 117737 - 118483 | 27470.6 |
| is3 family transposase | BVL39_RS28365 | Not Available | Positive | 119183 - 119332 | 5867.04 |
| is3-like element is2 family transposase | BVL39_RS28370 | Not Available | Negative | 119345 - 120573 | 46430.7 |
| hypothetical protein | BVL39_RS28375 | Not Available | Positive | 120738 - 121184 | 16142.7 |
| hypothetical protein | BVL39_RS28380 | Not Available | Negative | 121280 - 121537 | 9620.55 |
| hypothetical protein | BVL39_RS28385 | Not Available | Positive | 122266 - 122478 | 7360.01 |
| dinq-like type i toxin dqlb | BVL39_RS29990 | Not Available | Positive | 123289 - 123384 | 3503.63 |
| lasso peptide microcin j25 | BVL39_RS28390 | Not Available | Negative | 123605 - 123781 | 6200.57 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





