Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1-like element is1a family transposase | BVL39_RS28280 | Not Available | Positive | 107256 - 107953 | 26483.3 |
| helicase uvrd | BVL39_RS28290 | Not Available | Negative | 108207 - 109229 | 39615.6 |
| atp-dependent nuclease | BVL39_RS28295 | Not Available | Negative | 109214 - 110779 | 59483.6 |
| type ii toxin-antitoxin system vapc family toxin | BVL39_RS28300 | Not Available | Negative | 110854 - 111270 | 15265.6 |
| type ii toxin-antitoxin system vapb family antitoxin | BVL39_RS28305 | Not Available | Negative | 111267 - 111497 | 8761.45 |
| aaa family atpase | BVL39_RS28310 | Not Available | Positive | 111884 - 114022 | 81007.2 |
| type ii toxin-antitoxin system vapc family toxin | BVL39_RS28315 | Not Available | Negative | 114184 - 114600 | 15230.6 |
| type ii toxin-antitoxin system vapb family antitoxin | BVL39_RS28320 | Not Available | Negative | 114597 - 114827 | 8816.38 |
| res family nad+ phosphorylase | BVL39_RS28330 | Not Available | Positive | 115246 - 115935 | 25083.6 |
| helix-turn-helix domain-containing protein | BVL39_RS28335 | Not Available | Negative | 115966 - 116655 | 25665.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





