Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | BVL39_RS28095 | Not Available | Positive | 74291 - 74988 | 26645.4 |
| tolc family protein | BVL39_RS28100 | Not Available | Negative | 75400 - 76770 | 51613.3 |
| macb family efflux pump subunit | BVL39_RS28105 | Not Available | Negative | 76774 - 78714 | 70389.8 |
| efflux rnd transporter periplasmic adaptor subunit | BVL39_RS28110 | Not Available | Negative | 78711 - 79898 | 43402.5 |
| is3 family transposase | BVL39_RS29790 | Not Available | Negative | 80493 - 80833 | 12247.8 |
| is3 family transposase | BVL39_RS28115 | Not Available | Positive | 80879 - 81204 | 12534.0 |
| is3 family transposase | BVL39_RS29795 | Not Available | Positive | 81214 - 81614 | 15515.4 |
| omptin family outer membrane protease | BVL39_RS28135 | Not Available | Positive | 82867 - 83820 | 35635.3 |
| sdr family oxidoreductase | BVL39_RS28145 | Not Available | Positive | 84253 - 85362 | 41024.3 |
| antimicrobial resistance protein mig-14 | BVL39_RS28150 | Not Available | Positive | 85431 - 86333 | 35089.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





