Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | BVL39_RS29340 | Not Available | Positive | 25913 - 26092 | 7027.37 |
| is3 family transposase | BVL39_RS27815 | Not Available | Negative | 26253 - 26524 | 10755.0 |
| hnh endonuclease signature motif containing protein | BVL39_RS27820 | Not Available | Positive | 26620 - 26853 | 8916.71 |
| bacteriocin immunity protein | BVL39_RS27825 | Not Available | Positive | 26854 - 27111 | 9953.5 |
| mdr family mfs transporter | BVL39_RS27830 | Not Available | Negative | 27189 - 28376 | 41637.3 |
| abc transporter atp-binding protein | BVL39_RS27835 | Not Available | Negative | 28433 - 29194 | 28056.3 |
| feccd family abc transporter permease | BVL39_RS27840 | Not Available | Negative | 29194 - 30231 | 35604.3 |
| abc transporter substrate-binding protein | BVL39_RS27845 | Not Available | Negative | 30231 - 31229 | 36377.7 |
| is3 family transposase | BVL39_RS27850 | Not Available | Negative | 31379 - 31537 | 6162.3 |
| recombinase family protein | BVL39_RS27855 | Not Available | Negative | 31584 - 32174 | 22005.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





