Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | BVL39_RS27760 | Not Available | Negative | 17676 - 18632 | 34217.1 |
| duf1116 domain-containing protein | BVL39_RS27765 | Not Available | Negative | 18625 - 20049 | 50156.6 |
| acyl-coa synthetase fdra | BVL39_RS27770 | Not Available | Negative | 20046 - 21605 | 55164.1 |
| duf2877 domain-containing protein | BVL39_RS27775 | Not Available | Negative | 21700 - 22560 | 31999.6 |
| cysteine hydrolase family protein | BVL39_RS27780 | Not Available | Negative | 22566 - 23234 | 24120.3 |
| is3 family transposase | BVL39_RS29750 | Not Available | Negative | 23504 - 23588 | 2920.41 |
| is3 family transposase | BVL39_RS27785 | Not Available | Negative | 23693 - 24124 | 16684.1 |
| is3 family transposase | BVL39_RS29335 | Not Available | Positive | 24181 - 24829 | 22837.1 |
| is3 family transposase | BVL39_RS27800 | Not Available | Negative | 24873 - 25703 | 31394.6 |
| type ii toxin-antitoxin system rele/pare family toxin | BVL39_RS27805 | Not Available | Positive | 25628 - 25867 | 8807.74 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





