Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | CRE1540 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CRE1540 plasmid p1540-3, complete
Gene Summary
Adenine Count
29142 bp
Thymine Count
29860 bp
Guanine Count
28358 bp
Cytosine Count
28668 bp
Genome Length
116028 bp
Protein-coding Genes
20 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 4b pilus protein pilo2 | BVL39_RS25805 | Not Available | Negative | 41635 - 42945 | 49379.7 |
| piln family type ivb pilus formation outer membrane protein | BVL39_RS25810 | Not Available | Negative | 42996 - 44639 | 58039.9 |
| sigma 54-interacting transcriptional regulator | BVL39_RS25815 | Not Available | Negative | 44632 - 45168 | 20470.1 |
| type iv secretory system conjugative dna transfer family protein | BVL39_RS25820 | Not Available | Negative | 45215 - 47173 | 73408.1 |
| p-type dna transfer atpase virb11 | BVL39_RS25825 | Not Available | Negative | 47189 - 48244 | 39831.7 |
| trbi/virb10 family protein | BVL39_RS25830 | Not Available | Negative | 48263 - 49402 | 41205.2 |
| trbg/virb9 family p-type conjugative transfer protein | BVL39_RS25835 | Not Available | Negative | 49392 - 50093 | 26698.4 |
| virb8 family protein | BVL39_RS25840 | Not Available | Negative | 50159 - 50893 | 28204.9 |
| virb4 family type iv secretion system protein | BVL39_RS25850 | Not Available | Negative | 51059 - 53416 | 88384.5 |
| virb3 family type iv secretion system protein | BVL39_RS25855 | Not Available | Negative | 53422 - 53742 | 11912.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





