Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | HMPREF3212_00283 | Not Available | Negative | 283800 - 284876 | 38702.4 |
| asparagine--trna ligase | HMPREF3212_00284 | Not Available | Negative | 285477 - 286925 | 54261.4 |
| nicotinate phosphoribosyltransferase | HMPREF3212_00285 | Not Available | Negative | 287046 - 288248 | 46017.1 |
| membrane alanyl aminopeptidase | HMPREF3212_00286 | Not Available | Positive | 288515 - 291127 | 98935.2 |
| abc transporter, atp-binding protein | HMPREF3212_00287 | Not Available | Negative | 291199 - 291966 | 27672.7 |
| putative aliphatic sulfonates transport permease protein ssuc | HMPREF3212_00288 | Not Available | Negative | 291963 - 292754 | 29096.2 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | HMPREF3212_00289 | Not Available | Negative | 292765 - 293910 | 41706.7 |
| abc transporter, substrate-binding protein, aliphatic sulfonates family | HMPREF3212_00290 | Not Available | Negative | 293907 - 294881 | 35215.5 |
| fmn reductase | HMPREF3212_00291 | Not Available | Negative | 294874 - 295449 | 21152.3 |
| dihydroorotate oxidase | HMPREF3212_00292 | Not Available | Positive | 295817 - 296827 | 36623.6 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

