Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmso reductase, anchor subunit dmsc | HMPREF3212_00253 | Not Available | Positive | 244642 - 245475 | 29853.0 |
| isochorismatase family protein | HMPREF3212_00254 | Not Available | Negative | 245585 - 246211 | 23075.5 |
| transporter, major facilitator family protein | HMPREF3212_00255 | Not Available | Positive | 246620 - 247744 | 40589.3 |
| amino acid permease | HMPREF3212_00256 | Not Available | Positive | 247958 - 249379 | 52298.4 |
| pyruvate formate-lyase 1-activating enzyme | HMPREF3212_00257 | Not Available | Negative | 249423 - 250190 | 29336.2 |
| formate c-acetyltransferase | HMPREF3212_00258 | Not Available | Negative | 250349 - 252631 | 85014.4 |
| formate transporter foca | HMPREF3212_00259 | Not Available | Negative | 252691 - 253548 | 30847.4 |
| ycao-like family protein | HMPREF3212_00260 | Not Available | Negative | 253953 - 255713 | 65499.9 |
| hypothetical protein | HMPREF3212_00261 | Not Available | Positive | 255850 - 256542 | 26016.2 |
| phosphoserine transaminase | HMPREF3212_00262 | Not Available | Positive | 256755 - 257843 | 39721.4 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

