Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | HMPREF3212_00235 | Not Available | Negative | 222186 - 223775 | 57233.3 |
| hypothetical protein | HMPREF3212_00236 | Not Available | Negative | 223914 - 224045 | 4983.87 |
| isochorismatase family protein | HMPREF3212_00237 | Not Available | Negative | 224222 - 224929 | 25226.2 |
| pirin family protein | HMPREF3212_00238 | Not Available | Negative | 224916 - 225704 | 28380.4 |
| lysr substrate binding domain protein | HMPREF3212_00239 | Not Available | Positive | 225885 - 226796 | 33815.2 |
| translation initiation factor if-1 | HMPREF3212_00240 | Not Available | Negative | 226876 - 227094 | 8236.07 |
| Ncrna_class:other | Not Available | Not Available | Positive | 228075 - 228149 | Not Available |
| leucyltransferase | HMPREF3212_00241 | Not Available | Negative | 227380 - 228084 | 26678.0 |
| thiol reductant abc exporter, cydc subunit | HMPREF3212_00242 | Not Available | Negative | 228129 - 229850 | 62638.6 |
| thiol reductant abc exporter, cydd subunit | HMPREF3212_00243 | Not Available | Negative | 229851 - 231617 | 64997.1 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

