Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | HMPREF3212_00225 | Not Available | Positive | 213857 - 214921 | 39323.5 |
| deoxyribonuclease v | HMPREF3212_00226 | Not Available | Positive | 214931 - 215611 | 24845.3 |
| hypothetical protein | HMPREF3212_00227 | Not Available | Positive | 215645 - 216235 | 22703.0 |
| dna-binding protein hu-alpha | HMPREF3212_00228 | Not Available | Positive | 216422 - 216694 | 9521.48 |
| hypothetical protein | HMPREF3212_00229 | Not Available | Positive | 216700 - 217398 | 26396.9 |
| zinc resistance protein | HMPREF3212_00230 | Not Available | Negative | 217460 - 217903 | 15761.7 |
| hypothetical protein | HMPREF3212_00231 | Not Available | Negative | 217922 - 218110 | 7157.55 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF3212_00232 | Not Available | Positive | 218135 - 219553 | 51963.9 |
| response regulator/sigma54 interaction protein | HMPREF3212_00233 | Not Available | Positive | 219559 - 220884 | 48595.0 |
| phosphoribosylamine--glycine ligase | HMPREF3212_00234 | Not Available | Negative | 220881 - 222170 | 45789.6 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

