Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative exopolyphosphatase | HMPREF3212_00166 | Not Available | Positive | 154839 - 156266 | 53247.7 |
| atp-dependent dna helicase rep | HMPREF3212_00167 | Not Available | Negative | 156314 - 158335 | 77061.6 |
| peptidyl-prolyl cis-trans isomerase | HMPREF3212_00168 | Not Available | Positive | 158420 - 158701 | 10218.6 |
| ketol-acid reductoisomerase | HMPREF3212_00169 | Not Available | Negative | 158821 - 160296 | 54054.1 |
| hth-type transcriptional activator ilvy | HMPREF3212_00170 | Not Available | Positive | 160482 - 161363 | 32623.5 |
| short-chain alcohol dehydrogenase | HMPREF3212_00171 | Not Available | Positive | 161536 - 162729 | 43435.7 |
| threonine ammonia-lyase | HMPREF3212_00172 | Not Available | Negative | 162793 - 164343 | 56409.8 |
| dihydroxy-acid dehydratase | HMPREF3212_00173 | Not Available | Negative | 164343 - 166151 | 64067.8 |
| branched-chain-amino-acid transaminase | HMPREF3212_00174 | Not Available | Negative | 166254 - 167183 | 34131.6 |
| putative acetolactate synthase isozyme 2 small subunit | HMPREF3212_00175 | Not Available | Negative | 167201 - 167464 | 9724.75 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

