Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 136439 - 136515 | Not Available |
| putative proline-specific permease proy | HMPREF3212_00150 | Not Available | Negative | 136618 - 138003 | 50285.9 |
| glycosyltransferase, wecb/taga/cpsf family | HMPREF3212_00151 | Not Available | Negative | 138281 - 139021 | 27840.7 |
| eca biosynthesis protein wzye | HMPREF3212_00152 | Not Available | Negative | 139021 - 140376 | 51678.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 140884 - 140951 | Not Available |
| tdp-fuc4nac:lipid ii fuc4nac transferase | HMPREF3212_00153 | Not Available | Negative | 140373 - 141452 | 40440.3 |
| polysaccharide biosynthesis protein | HMPREF3212_00154 | Not Available | Negative | 141449 - 142699 | 44903.2 |
| dtdp-4-amino-4,6-dideoxy-d-glucose transaminase | HMPREF3212_00155 | Not Available | Negative | 142701 - 143831 | 42026.5 |
| tdp-d-fucosamine acetyltransferase | HMPREF3212_00156 | Not Available | Negative | 143836 - 144513 | 24571.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 144575 - 144742 | Not Available |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

