Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis methyltransferase | HMPREF3212_00116 | Not Available | Negative | 103734 - 104489 | 28041.7 |
| putative dna recombination protein rmuc | HMPREF3212_00117 | Not Available | Negative | 104584 - 105999 | 53998.8 |
| uridine phosphorylase | HMPREF3212_00118 | Not Available | Negative | 106155 - 106961 | 28857.0 |
| carboxymethylenebutenolidase | HMPREF3212_00119 | Not Available | Positive | 107302 - 107988 | 25191.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 109373 - 109447 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 110269 - 110438 | Not Available |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | HMPREF3212_00120 | Not Available | Negative | 108043 - 110304 | 84382.6 |
| hth-type transcriptional regulator metr | HMPREF3212_00121 | Not Available | Positive | 110540 - 111493 | 35739.1 |
| carboxylate/amino acid/amine transporter | HMPREF3212_00122 | Not Available | Negative | 111381 - 112280 | 33531.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 113127 - 113205 | Not Available |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

