Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_02489 | Not Available | Negative | 2466666 - 2466878 | 7802.26 |
| Tail protein | HMPREF3212_02490 | Not Available | Positive | 2467045 - 2467638 | 21393.2 |
| Attr | Not Available | Not Available | Positive | 2467259 - 2467270 | Not Available |
| Hypothetical protein | HMPREF3212_02491 | Not Available | Positive | 2467638 - 2468222 | 21455.2 |
| Hypothetical protein | HMPREF3212_02492 | Not Available | Positive | 2468229 - 2468627 | 14422.3 |
| Tail fiber protein | HMPREF3212_02493 | Not Available | Positive | 2468627 - 2471347 | 98375.3 |
| Hypothetical protein | HMPREF3212_02494 | Not Available | Positive | 2471347 - 2472291 | 34052.7 |
| Minor tail protein | HMPREF3212_02495 | Not Available | Positive | 2472301 - 2472672 | 12667.9 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1 - 1060 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 107 - 221 | Not Available |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

