Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | HMPREF3212_02469 | Not Available | Positive | 2453378 - 2453530 | 5891.96 |
| hypothetical protein | HMPREF3212_02470 | Not Available | Positive | 2453640 - 2454056 | 15757.6 |
| hypothetical protein | HMPREF3212_02471 | Not Available | Positive | 2454223 - 2454438 | 7895.45 |
| hypothetical protein | HMPREF3212_02472 | Not Available | Negative | 2454489 - 2454743 | 8963.38 |
| Terminase small subunit | HMPREF3212_02473 | Not Available | Positive | 2454933 - 2455430 | 18909.5 |
| Terminase large subunit | HMPREF3212_02474 | Not Available | Positive | 2455430 - 2457187 | 65839.6 |
| hypothetical protein | HMPREF3212_02475 | Not Available | Positive | 2457184 - 2457345 | 5378.9 |
| Portal protein | HMPREF3212_02476 | Not Available | Positive | 2457335 - 2458561 | 46235.1 |
| Capsid protease | HMPREF3212_02477 | Not Available | Positive | 2458554 - 2459153 | 22583.4 |
| Capsid | HMPREF3212_02478 | Not Available | Positive | 2459163 - 2460401 | 45475.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

