Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Sos response associated peptidase | HMPREF3212_01332 | Not Available | Negative | 1327366 - 1328022 | 24415.1 |
| Attl | Not Available | Not Available | Positive | 2236624 - 2236636 | Not Available |
| Site-specific integrase | HMPREF3212_02223 | Not Available | Negative | 2236806 - 2237828 | 38434.5 |
| Repressor protein ci | HMPREF3212_02224 | Not Available | Negative | 2237830 - 2238462 | 22837.4 |
| Rha family transcriptional regulator | HMPREF3212_02225 | Not Available | Positive | 2238582 - 2238824 | 9242.23 |
| Regulatory cii family protein | HMPREF3212_02226 | Not Available | Positive | 2238857 - 2239366 | 18271.1 |
| Duf2724 domain-containing protein | HMPREF3212_02227 | Not Available | Positive | 2239428 - 2239574 | 5675.11 |
| Duf5347 domain-containing protein | HMPREF3212_02228 | Not Available | Positive | 2239538 - 2239879 | 12786.5 |
| Duf2732 family protein | HMPREF3212_02229 | Not Available | Positive | 2239947 - 2240180 | 8638.3 |
| Dksa-like zinc finger domain containing protein | HMPREF3212_02230 | Not Available | Positive | 2240180 - 2240407 | 8359.19 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

