Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative chaperone | HMPREF3212_00685 | Not Available | Positive | 696632 - 697999 | 49735.5 |
| efflux transporter, rnd family, mfp subunit | HMPREF3212_00687 | Not Available | Positive | 698437 - 699684 | 44275.5 |
| putative atp synthase f0, a subunit | HMPREF3212_00688 | Not Available | Positive | 699684 - 702806 | 111902.0 |
| multidrug resistance protein mdtc | HMPREF3212_00689 | Not Available | Positive | 702807 - 705887 | 111101.0 |
| transporter, major facilitator family protein | HMPREF3212_00690 | Not Available | Positive | 705884 - 707296 | 50931.3 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF3212_00691 | Not Available | Positive | 707296 - 708699 | 52218.6 |
| response regulator receiver domain protein | HMPREF3212_00692 | Not Available | Positive | 708696 - 709418 | 27635.6 |
| hypothetical protein | HMPREF3212_00693 | Not Available | Positive | 709554 - 709886 | 11998.0 |
| peptidase, u32 family | HMPREF3212_00694 | Not Available | Positive | 710046 - 711407 | 51338.3 |
| atp-dependent clp protease atp-binding subunit clpa | HMPREF3212_00696 | Not Available | Negative | 711677 - 713953 | 84185.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

