Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tyrosine-protein kinase ptk | HMPREF3212_00675 | Not Available | Negative | 682796 - 684958 | 79233.5 |
| low molecular weight protein-tyrosine-phosphatase etp | HMPREF3212_00676 | Not Available | Negative | 684955 - 685404 | 16686.2 |
| amylovoran export outer membrane protein amsh | HMPREF3212_00677 | Not Available | Negative | 685410 - 686549 | 41583.1 |
| hypothetical protein | HMPREF3212_00678 | Not Available | Negative | 686974 - 687138 | 6420.7 |
| transporter associated domain protein | HMPREF3212_00679 | Not Available | Positive | 687188 - 688789 | 59750.2 |
| asma family protein | HMPREF3212_00680 | Not Available | Negative | 688834 - 690687 | 68683.1 |
| dctp deaminase | HMPREF3212_00681 | Not Available | Negative | 690714 - 691295 | 21255.4 |
| uridine kinase | HMPREF3212_00682 | Not Available | Negative | 691387 - 692028 | 24450.6 |
| pas domain s-box protein | HMPREF3212_00683 | Not Available | Positive | 692293 - 695673 | 126487.0 |
| dna-3-methyladenine glycosylase 2 | HMPREF3212_00684 | Not Available | Negative | 695641 - 696510 | 31785.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

