Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_00625 | Not Available | Positive | 628534 - 628674 | 5515.02 |
| lysr substrate binding domain protein | HMPREF3212_00626 | Not Available | Negative | 628671 - 629645 | 35822.1 |
| nad dependent epimerase/dehydratase family protein | HMPREF3212_00627 | Not Available | Negative | 629642 - 630625 | 35929.6 |
| atp phosphoribosyltransferase | HMPREF3212_00628 | Not Available | Positive | 630832 - 631731 | 33206.6 |
| histidinol dehydrogenase | HMPREF3212_00629 | Not Available | Positive | 631728 - 633041 | 46470.4 |
| histidinol-phosphate transaminase | HMPREF3212_00630 | Not Available | Positive | 633038 - 634117 | 39957.9 |
| histidinol-phosphatase | HMPREF3212_00631 | Not Available | Positive | 634114 - 635181 | 40305.4 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | HMPREF3212_00632 | Not Available | Positive | 635181 - 635771 | 21617.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | HMPREF3212_00633 | Not Available | Positive | 635771 - 636508 | 25913.0 |
| imidazoleglycerol phosphate synthase, cyclase subunit | HMPREF3212_00634 | Not Available | Positive | 636490 - 637266 | 28530.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

