Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_00615 | Not Available | Negative | 618456 - 619457 | 37326.8 |
| dna gyrase inhibitory protein | HMPREF3212_00616 | Not Available | Negative | 619622 - 620089 | 17926.3 |
| d-alanyl-d-alanine carboxypeptidase dacd | HMPREF3212_00617 | Not Available | Negative | 620213 - 621385 | 43233.6 |
| hypothetical protein | HMPREF3212_00618 | Not Available | Negative | 621390 - 621512 | 4721.66 |
| nickel-dependent hydrogenase b-type cytochrome subunit | HMPREF3212_00619 | Not Available | Negative | 621525 - 622292 | 28611.8 |
| thiosulfate reductase electron transport protein phsb | HMPREF3212_00620 | Not Available | Negative | 622289 - 622867 | 21595.6 |
| putative polysulfide reductase chain a | HMPREF3212_00621 | Not Available | Negative | 622882 - 624849 | 72117.4 |
| exodeoxyribonuclease i | HMPREF3212_00622 | Not Available | Positive | 625556 - 626980 | 54369.3 |
| amino acid permease | HMPREF3212_00623 | Not Available | Negative | 627040 - 628329 | 47049.4 |
| hypothetical protein | HMPREF3212_00624 | Not Available | Positive | 628400 - 628537 | 5283.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

