Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_00565 | Not Available | Positive | 576621 - 576752 | 4730.05 |
| putative iron uptake protein a2 | HMPREF3212_00566 | Not Available | Positive | 577063 - 578100 | 37565.1 |
| abc transporter, permease protein | HMPREF3212_00567 | Not Available | Positive | 578084 - 579772 | 60531.8 |
| abc transporter, atp-binding protein | HMPREF3212_00568 | Not Available | Positive | 579783 - 580466 | 25261.6 |
| protein erfk/srfk | HMPREF3212_00569 | Not Available | Negative | 580491 - 581387 | 32663.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | HMPREF3212_00570 | Not Available | Negative | 581548 - 582612 | 36341.6 |
| adenosylcobinamide-gdp ribazoletransferase | HMPREF3212_00571 | Not Available | Negative | 582637 - 583380 | 26278.4 |
| adenosylcobalamin biosynthesis protein cobu | HMPREF3212_00572 | Not Available | Negative | 583377 - 583922 | 19970.0 |
| cobyric acid synthase cobq | HMPREF3212_00573 | Not Available | Negative | 583919 - 585439 | 55143.4 |
| cobalt abc transporter, atp-binding protein | HMPREF3212_00574 | Not Available | Negative | 585436 - 586251 | 30033.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

