Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_00525 | Not Available | Negative | 525072 - 525197 | 4949.15 |
| hypothetical protein | HMPREF3212_00526 | Not Available | Positive | 525391 - 525639 | 8975.93 |
| transglycosylase slt domain protein | HMPREF3212_00527 | Not Available | Positive | 525687 - 526382 | 25409.2 |
| conjugal transfer protein trbc | HMPREF3212_00528 | Not Available | Positive | 526360 - 526641 | 9922.21 |
| type iv secretion/conjugal transfer atpase, virb4 family | HMPREF3212_00529 | Not Available | Positive | 526653 - 529202 | 96266.8 |
| hypothetical protein | HMPREF3212_00530 | Not Available | Positive | 529210 - 529410 | 7316.1 |
| type iv secretion system protein | HMPREF3212_00531 | Not Available | Positive | 529416 - 530153 | 27486.4 |
| hypothetical protein | HMPREF3212_00532 | Not Available | Positive | 530194 - 530439 | 9191.82 |
| trbl/virb6 plasmid conjugal transfer protein | HMPREF3212_00533 | Not Available | Positive | 530500 - 531543 | 36713.1 |
| hypothetical protein | HMPREF3212_00535 | Not Available | Negative | 531590 - 531763 | 6500.86 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

