Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | HMPREF3212_00514 | Not Available | Positive | 511606 - 513072 | 53569.2 |
| hydrogen peroxide-inducible protein activator | HMPREF3212_00516 | Not Available | Positive | 513336 - 514253 | 34109.6 |
| soluble pyridine nucleotide transhydrogenase | HMPREF3212_00517 | Not Available | Negative | 514236 - 515636 | 51545.5 |
| hth-type transcriptional repressor fabr | HMPREF3212_00518 | Not Available | Positive | 515807 - 516463 | 24904.9 |
| hypothetical protein | HMPREF3212_00519 | Not Available | Positive | 516479 - 516838 | 13038.3 |
| trna (uracil-5-)-methyltransferase | HMPREF3212_00520 | Not Available | Negative | 516921 - 518021 | 42048.3 |
| tonb-dependent vitamin b12 receptor | HMPREF3212_00521 | Not Available | Positive | 518389 - 520227 | 68029.5 |
| hypothetical protein | HMPREF3212_00522 | Not Available | Positive | 522435 - 522791 | 13830.3 |
| hypothetical protein | HMPREF3212_00523 | Not Available | Positive | 522992 - 523900 | 34804.4 |
| hypothetical protein | HMPREF3212_00524 | Not Available | Positive | 524261 - 524845 | 22461.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

