Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase | HMPREF3212_00454 | Not Available | Negative | 448741 - 449568 | 30209.4 |
| l-rhamnose isomerase | HMPREF3212_00455 | Not Available | Negative | 449627 - 450886 | 47198.0 |
| rhamnulokinase | HMPREF3212_00456 | Not Available | Negative | 450883 - 452298 | 52458.5 |
| hypothetical protein | HMPREF3212_00457 | Not Available | Positive | 452457 - 452597 | 5339.59 |
| hypothetical protein | HMPREF3212_00458 | Not Available | Negative | 452617 - 452868 | 10244.7 |
| putative hth-type transcriptional activator rhas | HMPREF3212_00459 | Not Available | Positive | 452905 - 453504 | 22989.6 |
| hth-type transcriptional activator rhar | HMPREF3212_00460 | Not Available | Positive | 453482 - 454483 | 38540.0 |
| l-rhamnose-proton symporter | HMPREF3212_00461 | Not Available | Negative | 454480 - 455514 | 37136.9 |
| superoxide dismutase | HMPREF3212_00462 | Not Available | Positive | 455798 - 456424 | 23202.3 |
| 2-keto-3-deoxygluconate transporter | HMPREF3212_00463 | Not Available | Positive | 456559 - 457641 | 37458.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

