Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain protein | HMPREF3212_00434 | Not Available | Positive | 432154 - 432534 | 13906.0 |
| formate dehydrogenase accessory protein fdhe | HMPREF3212_00435 | Not Available | Negative | 432571 - 433500 | 34856.7 |
| formate dehydrogenase, gamma subunit | HMPREF3212_00436 | Not Available | Negative | 433497 - 434132 | 24665.7 |
| formate dehydrogenase, beta subunit | HMPREF3212_00437 | Not Available | Negative | 434129 - 435031 | 32992.0 |
| formate dehydrogenase, alpha subunit | HMPREF3212_00438 | Not Available | Negative | 435044 - 437458 | 89181.7 |
| tat pathway signal sequence domain protein | HMPREF3212_00439 | Not Available | Negative | 437507 - 438115 | 22144.4 |
| accessory protein fdhd, formate dehydrogenase family | HMPREF3212_00440 | Not Available | Positive | 438288 - 439124 | 30472.9 |
| hypothetical protein | HMPREF3212_00441 | Not Available | Negative | 439091 - 439597 | 18679.5 |
| hypothetical protein | HMPREF3212_00442 | Not Available | Negative | 439656 - 440069 | 16019.2 |
| hypothetical protein | HMPREF3212_00443 | Not Available | Positive | 440087 - 440227 | 5331.43 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

