Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | HMPREF3212_00424 | Not Available | Negative | 423980 - 424855 | 31818.6 |
| phosphogluconate dehydrogenase, nad binding domain protein | HMPREF3212_00425 | Not Available | Negative | 424866 - 425789 | 32371.3 |
| kinase, pfkb family | HMPREF3212_00426 | Not Available | Positive | 425923 - 426825 | 31860.5 |
| putative glycerol-3-phosphate regulon repressor | HMPREF3212_00427 | Not Available | Positive | 426838 - 427662 | 29905.6 |
| had hydrolase, family ia, variant 3 | HMPREF3212_00428 | Not Available | Positive | 427885 - 428367 | 18357.6 |
| pp_00418 | HMPREF3212_00429 | Not Available | Positive | 428361 - 429233 | Not Available |
| d-tyrosyl-trna(tyr) deacylase | HMPREF3212_00430 | Not Available | Positive | 429230 - 429667 | 16003.1 |
| thioesterase domain protein | HMPREF3212_00431 | Not Available | Positive | 429664 - 430653 | 37154.5 |
| hydrolase, alpha/beta domain protein | HMPREF3212_00432 | Not Available | Negative | 430804 - 431712 | 33520.9 |
| ribbon-helix-helix protein, copg family | HMPREF3212_00433 | Not Available | Positive | 431873 - 432160 | 11291.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

