Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pseudoazurin | HMPREF3212_00352 | Not Available | Negative | 352641 - 353102 | 17222.8 |
| putative ferrichrome abc transporter, atp-binding protein fhuc | HMPREF3212_00353 | Not Available | Negative | 353092 - 353907 | 30234.7 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF3212_00354 | Not Available | Negative | 353904 - 354953 | 35955.1 |
| periplasmic binding protein | HMPREF3212_00355 | Not Available | Negative | 355038 - 356096 | 38077.5 |
| acetyltransferase, gnat family | HMPREF3212_00356 | Not Available | Negative | 356778 - 357296 | 20566.9 |
| purine nucleoside phosphorylase | HMPREF3212_00357 | Not Available | Positive | 357605 - 358312 | 25650.2 |
| transporter, major facilitator family protein | HMPREF3212_00358 | Not Available | Positive | 358351 - 359514 | 41895.5 |
| nucleoside-specific channel-forming protein tsx | HMPREF3212_00359 | Not Available | Positive | 359601 - 360434 | 31977.5 |
| cyclic nucleotide-binding domain protein | HMPREF3212_00360 | Not Available | Negative | 360479 - 361165 | 26765.2 |
| chaperone modulatory protein cbpm | HMPREF3212_00361 | Not Available | Negative | 361288 - 361581 | 11237.4 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

