Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate binding domain protein | HMPREF3212_04955 | Not Available | Negative | 4909478 - 4910392 | 34767.2 |
| putative membrane protein | HMPREF3212_04956 | Not Available | Positive | 4910495 - 4911409 | 33368.7 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3212_04957 | Not Available | Negative | 4911422 - 4912219 | 27221.0 |
| drug resistance transporter, bcr/cfla subfamily | HMPREF3212_04958 | Not Available | Negative | 4912384 - 4913595 | 44529.3 |
| trka protein | HMPREF3212_04960 | Not Available | Negative | 4914080 - 4915765 | 60132.7 |
| hypothetical protein | HMPREF3212_04961 | Not Available | Positive | 4916035 - 4916415 | 14212.0 |
| glutaredoxin, grxa family | HMPREF3212_04962 | Not Available | Negative | 4916450 - 4916713 | 9836.72 |
| hypothetical protein | HMPREF3212_04963 | Not Available | Positive | 4916886 - 4917176 | 10468.3 |
| oxygen-insensitive nadph nitroreductase | HMPREF3212_04964 | Not Available | Positive | 4917160 - 4917882 | 26807.0 |
| alpha-l-glutamate ligase, rimk family | HMPREF3212_04965 | Not Available | Positive | 4917867 - 4918844 | 35382.3 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

