Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase protein | HMPREF3212_04945 | Not Available | Negative | 4901233 - 4901859 | 23519.1 |
| d-alanyl-d-alanine carboxypeptidase daca | HMPREF3212_04946 | Not Available | Positive | 4902149 - 4903390 | 45122.3 |
| deoxyribose operon repressor | HMPREF3212_04947 | Not Available | Negative | 4903435 - 4904193 | 28621.5 |
| pap2 family protein | HMPREF3212_04948 | Not Available | Negative | 4904258 - 4904917 | 24631.7 |
| multidrug translocase mdfa | HMPREF3212_04949 | Not Available | Positive | 4905165 - 4906397 | 44248.6 |
| hypothetical protein | HMPREF3212_04950 | Not Available | Negative | 4906426 - 4906707 | 9806.89 |
| cof-like hydrolase | HMPREF3212_04951 | Not Available | Negative | 4906815 - 4907630 | 30560.1 |
| hypothetical protein | HMPREF3212_04953 | Not Available | Negative | 4907630 - 4908589 | 32822.6 |
| hypothetical protein | HMPREF3212_04952 | Not Available | Positive | 4908588 - 4908878 | 10949.4 |
| transcriptional regulator, tetr family | HMPREF3212_04954 | Not Available | Positive | 4908924 - 4909472 | 20906.4 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

