Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04895 | Not Available | Negative | 4846777 - 4847739 | 36160.8 |
| phospholipase d domain protein | HMPREF3212_04896 | Not Available | Negative | 4847739 - 4848980 | 47629.2 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF3212_04897 | Not Available | Negative | 4848977 - 4849783 | 30261.2 |
| abc-2 type transporter | HMPREF3212_04898 | Not Available | Negative | 4850242 - 4851348 | 41458.3 |
| abc-2 type transporter | HMPREF3212_04899 | Not Available | Negative | 4851359 - 4852492 | 42215.5 |
| abc transporter, atp-binding protein | HMPREF3212_04900 | Not Available | Negative | 4852485 - 4854221 | 62937.2 |
| auxiliary transport protein, membrane fusion protein family protein | HMPREF3212_04901 | Not Available | Negative | 4854214 - 4855209 | 36273.8 |
| transcriptional regulator, tetr family | HMPREF3212_04902 | Not Available | Negative | 4855206 - 4855883 | 25061.0 |
| atp-dependent rna helicase rhle | HMPREF3212_04903 | Not Available | Positive | 4856105 - 4857451 | 49299.5 |
| hypothetical protein | HMPREF3212_04904 | Not Available | Positive | 4857548 - 4859698 | 81304.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

