Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization repressor | HMPREF3212_04875 | Not Available | Positive | 4828486 - 4829205 | 26989.3 |
| urocanate hydratase | HMPREF3212_04876 | Not Available | Positive | 4829429 - 4831114 | 61401.9 |
| histidine ammonia-lyase | HMPREF3212_04877 | Not Available | Positive | 4831116 - 4832636 | 53997.2 |
| raf-like protein | HMPREF3212_04878 | Not Available | Negative | 4832732 - 4833208 | 17049.0 |
| adenosylmethionine-8-amino-7-oxononanoate transaminase | HMPREF3212_04879 | Not Available | Negative | 4833266 - 4834555 | 47019.9 |
| biotin synthase | HMPREF3212_04880 | Not Available | Positive | 4834656 - 4835672 | 37729.0 |
| 8-amino-7-oxononanoate synthase | HMPREF3212_04881 | Not Available | Positive | 4835669 - 4836826 | 41915.0 |
| biotin biosynthesis protein bioc | HMPREF3212_04882 | Not Available | Positive | 4836810 - 4837565 | 28095.3 |
| dethiobiotin synthase | HMPREF3212_04883 | Not Available | Positive | 4837558 - 4838256 | 24608.4 |
| abc transporter, atp-binding protein | HMPREF3212_04884 | Not Available | Negative | 4838222 - 4838959 | 27453.5 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

