Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04805 | Not Available | Positive | 4756664 - 4757386 | 25922.4 |
| hypothetical protein | HMPREF3212_04806 | Not Available | Positive | 4757383 - 4758378 | 35696.7 |
| pyroglutamyl-peptidase i | HMPREF3212_04807 | Not Available | Positive | 4758388 - 4759032 | 22196.8 |
| endonuclease viii | HMPREF3212_04808 | Not Available | Positive | 4759047 - 4759838 | 29811.8 |
| putative membrane protein abrb | HMPREF3212_04809 | Not Available | Negative | 4759835 - 4760881 | 36961.1 |
| hypothetical protein | HMPREF3212_04810 | Not Available | Negative | 4761004 - 4761423 | 15459.8 |
| putative colicin-e7 immunity protein | HMPREF3212_04811 | Not Available | Negative | 4761485 - 4761766 | 11049.6 |
| hypothetical protein | HMPREF3212_04812 | Not Available | Negative | 4761828 - 4762166 | 13013.3 |
| type vi secretion system effector, hcp1 family | HMPREF3212_04813 | Not Available | Negative | 4762163 - 4763806 | 60954.8 |
| citrate (si)-synthase | HMPREF3212_04814 | Not Available | Negative | 4764027 - 4765310 | 48096.8 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

